decoupler.plot_barplot
- decoupler.plot_barplot(acts, contrast, top=25, vertical=False, cmap='coolwarm', vmin=None, vcenter=0, vmax=None, figsize=(7, 5), dpi=100, ax=None, return_fig=False, save=None)
Plot barplots showing the top absolute value activities.
- Parameters:
- actsDataFrame
Activities obtained from any method.
- contraststr
Name of the contrast (row) to plot.
- topint
Number of top features to plot.
- verticalbool
Whether to plot verticaly or horizontaly.
- cmapstr
Colormap to use.
- vminfloat, None
The value representing the lower limit of the color scale.
- vcenterfloat, None
The value representing the center of the color scale.
- vmaxfloat, None
The value representing the upper limit of the color scale.
- figsizetuple
Figure size.
- dpiint
DPI resolution of figure.
- axAxes, None
A matplotlib axes object. If None returns new figure.
- return_figbool
Whether to return a Figure object or not.
- savestr, None
Path to where to save the plot. Infer the filetype if ending on {
.pdf,.png,.svg}.
- Returns:
- figFigure, None
If return_fig, returns Figure object.