1.1.0
Installation
Usage
Cell type annotation from marker genes
Pathway activity inference
Transcription factor activity inference
Functional enrichment of biological terms
Pseudo-bulk functional analysis
API
Release notes
Reference
decoupler
Index
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Index
A
|
C
|
D
|
E
|
F
|
G
|
M
|
P
|
R
|
S
A
assign_groups() (in module decoupler)
C
check_corr() (in module decoupler)
D
decouple() (in module decoupler)
decoupler
module
E
extract() (in module decoupler)
F
filt_min_n() (in module decoupler)
format_contrast_results() (in module decoupler)
G
get_acts() (in module decoupler)
get_contrast() (in module decoupler)
get_dorothea() (in module decoupler)
get_net_mat() (in module decoupler)
get_progeny() (in module decoupler)
get_pseudobulk() (in module decoupler)
get_resource() (in module decoupler)
get_top_targets() (in module decoupler)
get_toy_data() (in module decoupler)
M
match() (in module decoupler)
melt() (in module decoupler)
module
decoupler
P
plot_volcano() (in module decoupler)
R
rename_net() (in module decoupler)
run_aucell() (in module decoupler)
run_consensus() (in module decoupler)
run_gsea() (in module decoupler)
run_gsva() (in module decoupler)
run_mlm() (in module decoupler)
run_ora() (in module decoupler)
run_ulm() (in module decoupler)
run_viper() (in module decoupler)
run_wmean() (in module decoupler)
run_wsum() (in module decoupler)
S
show_methods() (in module decoupler)
show_resources() (in module decoupler)
summarize_acts() (in module decoupler)
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v: 1.1.0
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