decoupler.swap_layer
- decoupler.swap_layer(adata, layer_key, inplace=False)
Swaps an
adata.X
for a given layer.Swaps an AnnData
X
matrix with a given layer. Generates a new object by default.- Parameters:
- adataAnnData
Annotated data matrix.
- layer_keystr
.layers
key to swap.- inplacebool
If
False
, return a copy. Otherwise, do operation inplace and returnNone
.
- Returns:
- layerAnnData, None
If
inplace=False
, new AnnData object with the given layer inX
and the originalX
stored in.layers
.