decoupler.plot_dotplot
- decoupler.plot_dotplot(df, x, y, c, s, scale=5, cmap='viridis_r', title=None, figsize=(3, 5), dpi=100, ax=None, return_fig=False, save=None)
Plot results of enrichment analysis as dots.
- Parameters:
- dfDataFrame
Results of enrichment analysis.
- xstr
Column name of
dfto use as continous value.- ystr
Column name of
dfto use as labels.- cstr
Column name of
dfto use for coloring.- sstr
Column name of
dfto use for dot size.- scaleint
Parameter to control the size of the dots.
- cmapstr
Colormap to use.
- titlestr, None
Text to write as title of the plot.
- figsizetuple
Figure size.
- dpiint
DPI resolution of figure.
- axAxes, None
A matplotlib axes object. If None returns new figure.
- return_figbool
Whether to return a Figure object or not.
- savestr, None
Path to where to save the plot. Infer the filetype if ending on {
.pdf,.png,.svg}.
- Returns:
- figFigure, None
If return_fig, returns Figure object.