stable
Main
Installation
API
Preprocessing:
Methods:
Running multiple methods:
General utils:
AnnData utils:
Omnipath wrappers:
Plotting
Metrics
decoupler.metric_auroc
decoupler.metric_auprc
decoupler.metric_mcauroc
decoupler.metric_mcauprc
metric_mcauprc()
Benchmark utils
Benchmark
Other
Release notes
Reference
Vignettes
Usage
Cell type annotation from marker genes
Pathway activity inference
Transcription factor activity inference
Functional enrichment of biological terms
Pseudo-bulk functional analysis
Spatial functional analysis
Bulk functional analysis
Benchmarking pipeline
Conversion to other organisms
decoupler
API
decoupler.metric_mcauprc
Edit on GitHub
decoupler.metric_mcauprc
decoupler.
metric_mcauprc
(
y_true
,
y_score
,
n_iter
=
1000
,
seed
=
42
)
Monte-Carlo Area Under the Precision-Recall Curve (AUPRC)