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Cell type annotation from marker genes
Pathway activity inference
Transcription factor activity inference
Functional enrichment of biological terms
Pseudo-bulk functional analysis
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Bulk functional analysis
Benchmarking pipeline
Conversion to other organisms

decoupler

API
decoupler.metric_mcauroc
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decoupler.metric_mcauroc

decoupler.metric_mcauroc(y_true, y_score, n_iter=1000, seed=42): Monte-Carlo Area Under the Receiver Operating characteristic Curve (AUROC)

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© Copyright 2022, Badia-i-Mompel P., Vélez Santiago J., Braunger J., Geiss C., Dimitrov D., Müller-Dott S., Taus P., Dugourd A., Holland C.H., Ramirez Flores R.O. and Saez-Rodriguez J.. Revision 2df96112.